GitHub Trending Pep8

A Swiss-Army-Knife for Bioinformaticians

dbAPIS is a database of anti-prokaryotic immune system proteins. The repository contains the codes and scripts used to generate and maintain the database.

Large scale Blast Score Ratio (BSR) analysis

TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes

Two pipelines to perform phylogenomic analysis

No repository description provided.

This is the desktop application that accompanies the Unipept project.

A fully automated pipeline to identify microcins along with their associated immunity proteins and export machinery

No repository description provided.

A universal metabolic model knowledge database (pan-GEM) for current existing yeast species with genome sequence, based on which we will build the GEMs of high quality for each yeast species.

Pep8 example codes for UQAM-INF2170

A Phylum-specific Automated Phylogenomic Inference Pipeline for Bacterial Sequences.

Scripts used in the annotation of B10K genomes

TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to major clades/families of transposon Open Reading Frames.

An Automated Phylogenomic Inference Pipeline for Bacterial and Archaeal Sequences.

No repository description provided.

No repository description provided.

Pipeline for generate Ks plots of transcriptome data.

Automated classification of Translated Genomics Element

Trinity rna-seq workshop at the Ragon Institute, Sept. 2017

ML based prediction of immunogenic neoantigens for immunotherapy